Nanded Fata, Pune, Maharashtra 411041
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Cell Biology Laboratory
Cell Biology & Molecular Division

In-Vitro Cell-Based Research & Cytotoxicity Assays

Standardized mammalian cell culture maintenance and high-throughput in-vitro cytotoxicity, apoptosis, oxidative stress, and molecular biology assays — providing mechanistic insights into test substance activity at the cellular level.

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Cell Lines Available
Cancer & Normal Lines
Throughput Format
96-Well Microplate
Key Endpoint
IC50 & SI Determination
Imaging
AO/PI Fluorescence
Cell Assay Suite

High-Throughput In-Vitro Biological Evaluation

In-vitro cell-based assays provide the primary mechanistic evidence for antiproliferative, cytotoxic, apoptotic, and cytoprotective activities of test compounds. Our cell biology laboratory maintains authenticated human cancer and normal cell lines in dedicated CO₂ incubators, using rigorously validated assay protocols that generate reproducible, quantitative data suitable for publication in peer-reviewed journals.

Cell Culture & Molecular Biology Lab Class II BSC Cell Culture Suite

Assay Menu

Cell Line Maintenance & Viability Studies

Certified human cancer cell lines (MCF-7 breast, HeLa cervical, A549 lung, HT-29 colon, HepG2 liver) and non-cancerous control cell lines (NIH-3T3, L929). Maintained in DMEM/RPMI-1640 with 10% FBS, penicillin-streptomycin, in 37°C/5% CO₂ incubators. Mycoplasma-free status confirmed. Trypan blue exclusion viability assessment and passage documentation maintained.

MCF-7HeLaA549HepG2NIH-3T3

MTT Assay & IC50 Determination

Colorimetric assessment of mitochondrial NAD(P)H-dependent cellular oxidoreductase activity using 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT). Dose-response curves generated across 6–8 concentrations (serial 2-fold dilution), with non-linear regression IC50 calculation using GraphPad Prism. Selectivity Index (SI = IC50 normal / IC50 cancer) calculated where applicable. Standard: Doxorubicin, Cisplatin.

MTT AssayIC50 CalculationDose-ResponseSelectivity Index

Annexin V/PI Apoptosis Analysis

Detection of early and late apoptotic cell populations using Annexin V-FITC and Propidium Iodide (PI) double staining followed by fluorescence microscopic analysis. Quantitative cell population categorization: live (Annexin⁻/PI⁻), early apoptotic (Annexin⁺/PI⁻), late apoptotic (Annexin⁺/PI⁺), and necrotic (Annexin⁻/PI⁺). Representative fluorescence photomicrographs provided.

Annexin V-FITCPropidium IodideEarly ApoptosisFluorescence Imaging

Intracellular ROS Detection (DCFH-DA)

Measurement of intracellular reactive oxygen species (ROS) accumulation using 2',7'-dichlorodihydrofluorescein diacetate (DCFH-DA) fluorescent probe. Cells loaded with DCFH-DA are treated with test compound and H₂O₂ (positive control). Relative fluorescence units (RFU) quantified by fluorescence microplate reader at excitation/emission 485/535 nm. Results expressed as % ROS generation vs. untreated control.

DCFH-DA ProbeOxidative StressRFU Quantification

AO/PI Dual Staining & Morphological Assessment

Acridine Orange (AO) and Propidium Iodide (PI) dual fluorescence staining for visual differentiation of viable, apoptotic, and necrotic cell populations under inverted fluorescence microscope. AO intercalates into double-stranded DNA (live cells fluoresce green); PI penetrates membrane-compromised cells (late apoptotic/necrotic cells fluoresce red). Documented with representative fluorescence photomicrographs.

AO/PI StainingFluorescence MicroscopyCell Morphology

Caspase-3/7 Activity & Cell Cycle Analysis

Caspase-3/7 apoptotic pathway activation measured by colorimetric caspase substrate cleavage assay (Ac-DEVD-pNA). Cell cycle distribution (G0/G1, S, G2/M phase arrest) assessed by PI staining and DNA content analysis via fluorescence microscopy or microplate reader. Cell cycle data interpreted relative to compound mechanism and dose.

Caspase-3/7Cell Cycle ArrestG2/M Phase

Standard Assay Workflow

01

Cell Seeding & Monolayer Preparation

Target cell lines seeded in 96-well plates at defined cell density. 24h pre-incubation for monolayer attachment at 37°C/5% CO₂.

02

Test Compound Treatment

Serial dilutions of test substance prepared in DMSO:culture medium (DMSO ≤ 0.1%). Treated cells incubated for 24h/48h/72h per protocol.

03

Reagent Addition & Incubation

MTT/DCFH-DA/Annexin V reagent added per assay protocol. Formazan crystals solubilized in DMSO for MTT; fluorescence read directly for ROS.

04

Absorbance / Fluorescence Reading

Multimode microplate reader records OD (570nm for MTT) or fluorescence emission. Minimum 3 independent replicates per concentration.

05

IC50 Calculation & Statistical Analysis

Non-linear regression (log concentration vs. % viability) in GraphPad Prism. One-way ANOVA + Dunnett's test. p < 0.05 threshold.

Equipment & Infrastructure

Class II BSC Hood
CO₂ Incubator (37°C)
Multimode Plate Reader
Inverted Fluorescence Microscope
Micro Centrifuge
-80°C Ultra-Low Freezer

Frequently Asked Questions

We regularly maintain MCF-7 (breast), HeLa (cervical), A549 (lung), HT-29 (colon), and HepG2 (liver) cancer cell lines, along with NIH-3T3 and L929 as non-cancerous controls for selectivity index calculation. Additional cell lines may be available upon specific request — please inquire during consultation.
Standard MTT assay uses 6–8 serial two-fold or log-scale concentrations. A typical starting range is 200–0.78 µg/mL (for extracts) or 100–0.78 µM (for pure compounds). The exact range is finalized based on preliminary toxicity data or literature reference. We recommend providing at least 50–100 mg of extract or 5–10 mg of pure compound for full assay execution.
Yes. All assay reports include mean ± SD from minimum 3 independent experiments, IC50 values with 95% CI from GraphPad Prism, representative fluorescence/brightfield photomicrographs, and statistical comparison tables — formatted in a manner consistent with expectations of standard pharmacology and cancer biology journals.
Note: In-vitro cytotoxicity data represents activity under controlled laboratory cell culture conditions and should not be interpreted as evidence of in-vivo efficacy, clinical safety, or therapeutic potential. All cell-based findings require further mechanistic and in-vivo validation before any scientific conclusion is drawn.

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